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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901274.1_cds_XP_016451294.1_45665
CDS Infomation

[gene=LOC107776001] [db_xref=GeneID:107776001] [protein=CDT1-like protein a, chloroplastic isoform X3] [protein_id=XP_016451294.1] [location=complement(join(61799..61853,63101..63191,63287..63482,63807..64472,64973..65198,65803..65922,66005..66234))] [gbkey=CDS]
Sequence

ATGGAGAAAACAGACCATGAAGTAACCAAAGAAGGAGTTTTGGATGTGAAAAATCAAAGC
TGTCTGCTCGAGGCAGAGAAGTCAAGTGTGCTATCTCCTTTACCTTTGCAGAAGAGGGGG
ATCGCTGTAGGCAACTCTATTGGAACAGATTTTTCATCTTGGACACCAGAGAAAAAGAAT
GAGCAATCACACACTAAACATGAAATACACATTGCTGAGCTTCCTGAAAGATACAGAAAA
TTGTCAGAGTTCTTTGATCGTATGCTTTGTTCCTTGAGGTTGCTCGGTCTGCGAAAAAGG
TCACCTACTTTTAAGAACGTGTCCAGTCAAGTCGAAGTACTTACAGGAAGAAAATTTTCA
CACAGGCATCTCGCACAGATAAAATATATAGTTCCTGAAGCCATTCAGATAGATAAATTA
CTTGTGCACGATGAGAAGACCATGTGCATGAAGCCAGATGTTAAAATTACCTTGCATTTA
GATGCTGTCGAAGATCACAAAGAACACTCAATGTTTATGACCCTCAGTAATCTTTTTGCA
TCCAGGCTTGTGGATTTTCTCCATAAACATGCTCAGCAGGATTGTGACATACCCGAAGCC
ATACTTCCAGATCCGTTTAACCAAAGCTGCCTCACTAGCGATGCAGACCGGTTGCCTATG
GATTTACCAAGTCCACTTGAGTCTGAATTGTTATCATCATCCCATCTCTGTCCATCCTTC
AGTTCACGCTTTTCTCGGCAGGCTGTTTCTACAGAAGCAAAGATAGATCATCTCTCAGTA
CCTTCGCCGGCATGCTTACCTTGTGTATCTGAATGTACATTGAATGAGGAACTTGATTCT
AAAAGGAGATCTCCTAAGTCACCCAAATCCTCCATCAACCTGAACAATGTTGAAGAGAGC
CAAACTCTACCAGGTTGTAGTTTGTTTGCAAATGAAAGAACTCCTATGAAGCTCCTGTCT
GAAAGTGAAGTAACGCTTGAAACACCTGCTCAGCCCACACCAAAGAGATCGGTGCCAATT
ACCGAAGATAAGTACAAGAGTATGACAGGCCAAAACTCTCTTGTTTCCAATCTAATTGTC
AAAAGGTCATTGGATTTCTCCACCTTGGGTGGTGAAGAAATGTCTTCAGATTTGAGTTCT
GGCAGTATAGAGCATCATGAAGATGCAGATAATGCCCTTATAATGGAAAGGAAGTCGATT
TCAAAGGAAGATCAAGTTAATGCTGATGTATACCCTCATGAGGAAAGGCGTTGCTCCTTT
AGCAAGGAAGAGAAGAATTATCAAAGTCATTTGACTGCGGCCCGGAAGGAATCTCTTGGT
TTATCCGATCTTGTTCGTCTAATTCACCGCATTTTCCAGTCTGTTGGCTGTCGTTCAATG
ACTAAAGTGGAACTTGTTCACAAGATCATAGTGAATGACTATGATATTGATGAGAACACT
GATGTGGAAGGGCAGATAGAACATCTTGAGAGACTAGTTCCAGAGTGGCTATGCAAGAAG
TCTGCCCCCACTGGAGACCTTTTGTACAGTATCAAGAAAGTTCCTGACTTGAGCTCTGTC
TGCGAAAGGGTTATAGGTGTATGA

Peptide Sequence

PEP ID

XP_016451294.1
PEP Infomation

PREDICTED: CDT1-like protein a, chloroplastic isoform X3 [Nicotiana tabacum]
Sequence

MEKTDHEVTKEGVLDVKNQSCLLEAEKSSVLSPLPLQKRGIAVGNSIGTDFSSWTPEKKN
EQSHTKHEIHIAELPERYRKLSEFFDRMLCSLRLLGLRKRSPTFKNVSSQVEVLTGRKFS
HRHLAQIKYIVPEAIQIDKLLVHDEKTMCMKPDVKITLHLDAVEDHKEHSMFMTLSNLFA
SRLVDFLHKHAQQDCDIPEAILPDPFNQSCLTSDADRLPMDLPSPLESELLSSSHLCPSF
SSRFSRQAVSTEAKIDHLSVPSPACLPCVSECTLNEELDSKRRSPKSPKSSINLNNVEES
QTLPGCSLFANERTPMKLLSESEVTLETPAQPTPKRSVPITEDKYKSMTGQNSLVSNLIV
KRSLDFSTLGGEEMSSDLSSGSIEHHEDADNALIMERKSISKEDQVNADVYPHEERRCSF
SKEEKNYQSHLTAARKESLGLSDLVRLIHRIFQSVGCRSMTKVELVHKIIVNDYDIDENT
DVEGQIEHLERLVPEWLCKKSAPTGDLLYSIKKVPDLSSVCERVIGV

Transcript Sequence

Gene sequence data has not been registered.